CDS
| Accession Number | TCMCG007C51422 |
| gbkey | CDS |
| Protein Id | XP_033136953.1 |
| Location | join(498515..498619,498847..499072,499168..499270,499342..499663,499819..499932,500018..500146,500226..500405,500504..500698,500863..501000,501292..501420,501550..501695,501788..501896,501972..502118,502202..502249,502323..502451,502528..502773,502936..503082,503173..503304,503388..503435,503502..503648,503718..503779,503941..504094,504210..504401,504470..504574,504663..504797,504888..505097,505191..505397) |
| Gene | LOC103836952 |
| GeneID | 103836952 |
| Organism | Brassica rapa |
Protein
| Length | 1334aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_033281062.1 |
| Definition | CCR4-NOT transcription complex subunit 1 isoform X3 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Domain of unknown function (DUF3819) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12604
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGCAATGCTCATGATTCCCTCCAAGGTCTCCAGTCATGTCCGGTTCTTACTTATGGAATTCAACGATTCCGACTATCACTCTCTGGCCCAAGAGATTTGTGAGTTCTTTGACTATGGAGTAGAAACTAGCATTTGCGTTCTCAAGACCTGCTTCACCTTTTGGAAAGAAGGCCACACAAATAGATTGCAAATTGAGAATGTAGTATCCTTGGTTCTCAAACGTGTCTTGGAAATGCCTTATTTCGCGACACTGCTTTCTTGCGCACTCCAAGGTTTTGAGGTCACTCCAGAGTTCGTCACTGCATTTCACTCTGATGCAAGCACAACTGATTCCTTCATGCAGATTTTATCCTGCCATCAGTCTAGTGATAAACTCCAATTTGTTCCCAACCCTTTCCCTTCAGTGGGACTGCATGAAGCTGACGTTTTCAGGAGCATGGATTTAAATAGCCTTGATGCTATCTTAACTGAAACTGCGAAGGAGACTAGTGTGGGAGATCTCATAGAAGAATTGGGTTATGGATTCACCTCTGATGCCTCACTATGCAAAGAGATCTTGTCCCTTTTCTTGCCATTAACAGAGGCTGCTATCTCAAGAATTCTTGTCGTTGTTGTTCGTACGTATGCTGGTCTTAAAGATAATTACGACGCCTTTCTAACATTCAGTTCGTCCCTTGGATGTTGCACCCCAACCGAACTTCACACACCAAAGTCATGGAATGTTGACATCCTTTTTGAGACAATTAAACAGCTAGCTCCTGGCACAATCTGGCCGACTGTAATTGAAAATCTGGATCATGAAGGATTTGATATTCCTAACATGGAGGCTTTCTTGTTTTTCATGATGGTTGTTAGAAATATCTGCAAGGACCCATTTCCTCTTCATGCCATTTGTTCTTTTGTGTGGAAAAATATGGAGGGTCAGCTATCTTTTCTTAAGCATGCAGTATTGGCACCGCCAGAAATATTCACCTTTGTCCACTCTACTAGGAAGCTGTTGCCTATGGACATCGATGAGCAATTAGCACTTTCCAATCATGCATGGCGGTCTCTTGATCTTTTAGATGTGCTATGCCAGTTGGCCGAGAGTGGGCATGCTGTTTCAGTTCGTTCATTGCTTCAGTATCCACTGGTCCATTGTCCTAGAACCTTGCTTCTTGGGATGACTCATATTGAAACTGCTTGTAATATCATTCAGCGTGAGGTGGTATCTGATTTACTTCCCCTGATGATAAAGAATACCCAGGATATTGGTTTTGTCCTTAACCTCTGGCAGCTGAATAGAGAATTTGTTATTTGGGGTCTTTTAGATGCCCAAAATCTCGGACCAGACAGCATGCTCAGAATAATTGATATCTTCCATGAGCTTAAGATTCTCTCTTCTGTTATAAACTCAGTTCCGCTGTCACTTGGCATCAAATTGGCAATCCTTGCCTCACAGAGAGGGTTTCTAGAGATTGAGAGTTGGTTGTCAAAATGCATTTTTCTGTACAAGGATGTCCTTTTTGAGGCTTTGAAACCGCATACTAACGTAATTACATCACGTCAACTGTTTGAAGAATTAGAAAAGGTCCATGAAGCAGTTTTGAACATAGGAACTTTTGTTGCTGCAGCGGAGAGAAAGGATAATCCAATAGAGGCGCCACCTTCAGAAGTTCAGGACAAAATCTATTTCATAATGAATAATGTCTCAGCAGCAAACGTTGAATCCAAAGGGAAAGAATTCTCTGAAATTTTGTCTATTCAGTACTACCCTTGGTTTGCCCAGTATATGGTCATAAAAAGAGTGAGTACCGAGCAACAGTTTCATGACTTGTACTTGAAGTTCTTGGACAAAGTTAATTCCCAGCAATTATACAAGGAGATAGTCCAAGCTTCCTATGAGAACTGCAAGGTTCTGTTAGGTTCAGCGCTCATAAAGTCAGATTCAGAAGAGCGGTCCTTGCTTAAAAACTTAGGCAGCTGGCTTGGGAAGGTGACCATTGGAAGGAATCGCGTTTTAAGGGCGTGTGAAATAGATCCAAAATCACTGATAATTGATGCATATGAAAAAGGGCTGCTTATTGCTATCCTTCCGTTCACTGCAAAGGTTTTGGAATCATGCCAAAGCAGTATTGCATATCAACCTCCGAATCCATGGACTATGCCTATACTCGGGTTGCTGTCAGAGATTTATTCAATGCCAAACCTTAAAATGAACCTGAAGTTTGAGATAGAGATTTTTTTCAAGAACATTGGGGTTAATATCAAAAGTGTAAAACCAACTTCCCTTCTGAAGAACCGGAACAGAGAAATAGATGGAAATCCTGATTTTAGGAACAAAGATGTTGGTATGGCCCAGGGATCCCGACCACAGATGATCGATGAGTTTAAATCTGAAAATATTTCTCCGCAAAACCATGTAGAGCTACCTACCAATGCAGGCATTCATTATGCAGGCGTTCATTCAAAGTTATTGCCACAGGCAACCATGCTTTTTTCTGAATGGTGTCAGATCTGCAGTCACCCTGGTGAAAATGATGCATCACGTACCCGCCATGTCTTGCATTTATATCAAAGTGGACTACTGAAGGGAGATGATAAAACTGAGAGCTTTTTCCGTATTCTTACAGAATATTCTATTGCTCATTGCATATCATCTCGGGAAACGAATTCTGGTGCCCTGCAATCTACTCAGGAAGTTCTGGAACCATCATTCATTGCCATCGATATCTATGCCAAACTTGTGTTTTCTATCTTGGATTATTTTCGTGAGCAGGAGTTTAGCTGCAAATCCTTTCTTCTTTCGAAGATAGTGACTGTCATTGTGAGATCTATTTTAAAGGACGCAGATGACGAAAAGACACCACTTTATCCAAGACCATATTTCAGATTGTTCATCAACTTGCTGCTTGATTTATCTTCCTGGGACCATATAACCGATAGTGAAAACTATCAGGTTTTAGTAGTTTTCGCAAATGCATTTCACGCGCTGCAGCCTCTTAAAATCCCCGCGTTCAGCTTAGCGTGGCTAGAACTGGTTAGTCACAGAAGCTTCATGCTCAAACTACTCTCCCTAAATGGTCAGAAGGGTTGGCCGTATGCTCAACACCTGCTGGTGGGTTTGCTTCAGTTTCTTGAGCCTTTTTTGAGAAGTGCTGAGCTAAGCGGACCGGTTTATCTGCTATACAAAGGCACACTGGAAGTATTGTTGATGTTGCTTCATGAGTACCCGGAGTTTCTTTGTGGTTACCATTTTACTTTCTGTAATGTCATTCCTCCCAGTTGCGTACAAATGCGGAACATTATCCTAGGTGCTTATCCGCGAAACATGAGGGTTCCAGACCCGTCGACTCCAAACTTGATGATTGATCGACTGCCTCAGATAGTTGAAGCTCCATGTATCCTTTCTGAAATCGACGCTCTACTTAAACAAAAGCGAATGAAGAGCCACTTGGATGAGTATCTTTCGATGAGGCAACATGATTTTAGTTTCCTAAATGGACTGAAGCATAACCTACTATTCCGAAACAGTGAGGCTGATTCAGCTGGCACTAGATACAATGTACCATTGGTCAACGCACTTGTCCTCTATGTTGGACTGCAGGCTATTCAGCAGCTACAGGCAGACGTGTCTGAGAGTCGGAGTAATGCACATACTGCCGCCATGCAGATGTTCAAGGCTTTAAGTTGTGAACTTGACGCGGAAGGACTTTACCTGTTGCTTAGTGCAATTGCCAACCAGCTAGGTCATCCCAACAGACACACACATTACTTCTCCTACATCATGCTCTATCTGTTTTTTGAGTCGGACCAGGAAATCATCAAGGAGCAGGTAACAAGAGTGTTGTTGGAGCGCCTAACCGTGAAGGGGCCACATCCATGGGGGCTCGTCTTCACGGTCACGGAGCTCACCAAGAATCCTAGATATGGGTTTAGGGAACAAGGGTTCATAAGGTGTGCACCAGGAATTGAGGAAGTATTTGAATCAGTTGCCAGTTCTGAAGCGGGGGTGAACACTTAG |
| Protein: MAMLMIPSKVSSHVRFLLMEFNDSDYHSLAQEICEFFDYGVETSICVLKTCFTFWKEGHTNRLQIENVVSLVLKRVLEMPYFATLLSCALQGFEVTPEFVTAFHSDASTTDSFMQILSCHQSSDKLQFVPNPFPSVGLHEADVFRSMDLNSLDAILTETAKETSVGDLIEELGYGFTSDASLCKEILSLFLPLTEAAISRILVVVVRTYAGLKDNYDAFLTFSSSLGCCTPTELHTPKSWNVDILFETIKQLAPGTIWPTVIENLDHEGFDIPNMEAFLFFMMVVRNICKDPFPLHAICSFVWKNMEGQLSFLKHAVLAPPEIFTFVHSTRKLLPMDIDEQLALSNHAWRSLDLLDVLCQLAESGHAVSVRSLLQYPLVHCPRTLLLGMTHIETACNIIQREVVSDLLPLMIKNTQDIGFVLNLWQLNREFVIWGLLDAQNLGPDSMLRIIDIFHELKILSSVINSVPLSLGIKLAILASQRGFLEIESWLSKCIFLYKDVLFEALKPHTNVITSRQLFEELEKVHEAVLNIGTFVAAAERKDNPIEAPPSEVQDKIYFIMNNVSAANVESKGKEFSEILSIQYYPWFAQYMVIKRVSTEQQFHDLYLKFLDKVNSQQLYKEIVQASYENCKVLLGSALIKSDSEERSLLKNLGSWLGKVTIGRNRVLRACEIDPKSLIIDAYEKGLLIAILPFTAKVLESCQSSIAYQPPNPWTMPILGLLSEIYSMPNLKMNLKFEIEIFFKNIGVNIKSVKPTSLLKNRNREIDGNPDFRNKDVGMAQGSRPQMIDEFKSENISPQNHVELPTNAGIHYAGVHSKLLPQATMLFSEWCQICSHPGENDASRTRHVLHLYQSGLLKGDDKTESFFRILTEYSIAHCISSRETNSGALQSTQEVLEPSFIAIDIYAKLVFSILDYFREQEFSCKSFLLSKIVTVIVRSILKDADDEKTPLYPRPYFRLFINLLLDLSSWDHITDSENYQVLVVFANAFHALQPLKIPAFSLAWLELVSHRSFMLKLLSLNGQKGWPYAQHLLVGLLQFLEPFLRSAELSGPVYLLYKGTLEVLLMLLHEYPEFLCGYHFTFCNVIPPSCVQMRNIILGAYPRNMRVPDPSTPNLMIDRLPQIVEAPCILSEIDALLKQKRMKSHLDEYLSMRQHDFSFLNGLKHNLLFRNSEADSAGTRYNVPLVNALVLYVGLQAIQQLQADVSESRSNAHTAAMQMFKALSCELDAEGLYLLLSAIANQLGHPNRHTHYFSYIMLYLFFESDQEIIKEQVTRVLLERLTVKGPHPWGLVFTVTELTKNPRYGFREQGFIRCAPGIEEVFESVASSEAGVNT |